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□-» Protein Structure Prediction: Methods and Protocols

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Title:  Protein Structure Prediction: Methods and Protocols
Division:  General Biochemistry / Others / 英文版
Author/Editor:  David M. Webster (editor)    Star:  
ISBN: 0896036375
Introduce Date:  2006年09月02日15:41 , Release Date:  2006年09月02日16:35
Introducer:  Dice , Rate: 0/135  
Format:  pdf(editorial)  Download 

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Description:

Protein Structure Prediction: Methods and Protocols, Vol. 143

by David M. Webster
ISBN: 0896036375
Publisher: Humana Press - January 2000
Format: Hardcover, pp. 300

World-class investigators detail their most successful methods—and the theory behind them—for delineating the shape, form, and function of proteins. The protocols range from basic to advanced and include sequence alignment, the prediction of transmembrane protein structure, and the development of suitable folding potentials. There are also techniques for receptor site prediction, the identification of motifs and domains, the comparative modeling of proteins, the docking of peptides and ligands, and ab initio approaches to protein loop and side-chain prediction. Comprehensive, accessible, and highly practical, Protein Structure Prediction: Methods and Protocols offers protein researchers, structural biologists, and other investigators a critical synthesis of the latest research results, as well as the vital guidance needed to understand the structure and interaction of proteins and peptides.

Content

Multiple Sequence Alignment
Desmond G, Higgens and William R. Taylor

Protein Structure Comparison Using SAP
William R. Taylor

Discovering Patterns Conserved in Sets of Unaligned Protein Sequences
Inge Jonassen

Identification of Domains from Protein Sequences
Chris P. Ponting and Ewan Birney

Third Generation Prediction of Secondary Structure
Burkhard Rost and Chris Sander

Comparative Protein Structure Modeling: Introduction and Practical Examples with Modeller
Roberto Sánchez and Andrej Sali

A Practical Guide to Protein Structure Prediction
David T. Jones

Derivation and Testing Residue-Residue Mean-Force Potentials for Use in Protein Structure Prediction
Boris A. Reva, Alexei V. Finkelstein, and Jeffery Skolnick

Genetic Algorithms and Protein Folding
Steffen Schulze-Kremer

Scoring Functions for ab initio Protein Structure Prediction
Enoch S. Huang, Ram Samudrala, and Brit H. Park

Ab Initio Loop Modeling and Its Application to Homology Modeling
Robert E. Bruccoleri

The Dead-End Elimination Theorem: Mathematical Aspects, Implementation, Optimizations, Evaluation, and Performance, Marc De Maeyer, Johan Desmet, and Ignace Lasters

Classification of Protein Folds
Robert B. Russell

Modeling Transmembrane Helix Bundles by Restrained MD Simulations
Mark S. P. Sansom and Leo Davison

Predictive Models of Protein-Active Sites
D. Eric Walters

Flexible Docking of Peptide Ligands to Proteins
Johan Desmet, Marc De Maeyer, and Ignace Lasters

Geometrical Docking Algorithms: A Practical Approach
Haim J. Wolfson and Ruth Nussinov

Protein-Protein Docking: Generation and Filtering of Complexes
Michael J. E. Sternberg, Henry A. Gabb, Richard M. Jackson, and Gidon Moont

Index.

http://www.humanapress.com/index ... &category=books

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